joinspots

A GUI-based program which for linking spots detected with SpotFinder family tools (SpotFinderZ, SpotfinderM, peakfinder). The program can perform automatic joining with a possibility of manual control and correction.

Usage

Initial setup

Initial setup window of joinspots

When started, the program opens the initial setup window, where the user can select the dataset and the parameters of detection. The window will dissapear when the operation starts, and therefore the parameter can no longer be changed. The window has the following controls:

Main window


Main window of joinspots

The main window will display an image of the currently selected cell on the currently selected frame (top left), the tree of spot connections for the currently selected cell (bottom) with the selected frame highlighted with a box, and a control panel (top right). The panel contains the following controls:

Output format

The program will output three data arrays:


Top pages: MicrobeTracker Tools, MicrobeTracker Suite.